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    AUP1 AUP1 lipid droplet regulating VLDL assembly factor [ Canis lupus familiaris (dog) ]

    Gene ID: 475783, updated on 5-Mar-2024

    Summary

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    Official Symbol
    AUP1provided by VGNC
    Official Full Name
    AUP1 lipid droplet regulating VLDL assembly factorprovided by VGNC
    Primary source
    VGNC:VGNC:38310
    See related
    Ensembl:ENSCAFG00845018596
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See AUP1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (49472997..49476542)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (48255441..48258987)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (49114568..49118113)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (48490146..48493692)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (48556890..48560436)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene docking protein 1 Neighboring gene lysyl oxidase like 3 Neighboring gene HtrA serine peptidase 2 Neighboring gene DEAQ-box RNA dependent ATPase 1 Neighboring gene T cell leukemia homeobox 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ancient ubiquitous protein 1; LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      49472997..49476542
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691642.1 → XP_038547570.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

      UniProtKB/TrEMBL
      A0A8C0NSL0, A0A8I3PC21
      Related
      ENSCAFP00845025768.1, ENSCAFT00845032931.1
      Conserved Domains (2) summary
      cd14420
      Location:365 → 409
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:135 → 333
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      48490146..48493692
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038499084.1 → XP_038355012.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

      Conserved Domains (2) summary
      cd14420
      Location:365 → 409
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:135 → 333
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      48556890..48560436
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625713.1 → XP_038481641.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

      Conserved Domains (2) summary
      cd14420
      Location:365 → 409
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:135 → 333
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      49114568..49118113
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561673.1 → XP_038417601.1  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

      UniProtKB/TrEMBL
      A0A8C0NSL0, A0A8I3PC21
      Conserved Domains (2) summary
      cd14420
      Location:365 → 409
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:135 → 333
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48255441..48258987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_847497.6 → XP_852590.3  LOW QUALITY PROTEIN: lipid droplet-regulating VLDL assembly factor AUP1

      UniProtKB/TrEMBL
      A0A8C0NSL0, A0A8I3PC21
      Conserved Domains (2) summary
      cd14420
      Location:365 → 409
      CUE_AUP1; CUE domain found in ancient ubiquitous protein 1 (AUP1) and similar proteins
      cl17185
      Location:135 → 333
      LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis
    Nucleotide Protein
    Heading Accession and Version

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