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    SMAR_RS05115 endonuclease [ Staphylothermus marinus F1 ]

    Gene ID: 4907913, updated on 14-Apr-2023

    Summary

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    Gene symbol
    SMAR_RS05115
    Gene description
    endonuclease
    Locus tag
    SMAR_RS05115
    Gene type
    protein coding
    Organism
    Staphylothermus marinus F1 (strain: F1, type-material: type strain of Staphylothermus marinus)
    Lineage
    Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus
    Old locus tag
    Smar_0987
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    Genomic context

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    Sequence:
    NC_009033.1 (966463..966984, complement)

    NC_009033.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene RtcB family protein Neighboring gene histidine--tRNA ligase Neighboring gene DUF996 domain-containing protein Neighboring gene DUF996 domain-containing protein Neighboring gene S-methyl-5-thioribose-1-phosphate isomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009033.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Complete genome sequence of Staphylothermus marinus Stetter and Fiala 1986 type strain F1. Anderson IJ, et al. Stand Genomic Sci, 2009 Sep 25. PMID 21304655, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    endonuclease

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009033.1 Reference assembly

      Range
      966463..966984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011839277.1 endonuclease [Staphylothermus marinus]

      See identical proteins and their annotated locations for WP_011839277.1

      UniProtKB/TrEMBL
      A3DN76
      Conserved Domains (3) summary
      PRK09297
      Location:17 → 169
      PRK09297; tRNA-splicing endonuclease subunit alpha; Reviewed
      pfam01974
      Location:83 → 161
      tRNA_int_endo; tRNA intron endonuclease, catalytic C-terminal domain
      pfam02778
      Location:7 → 72
      tRNA_int_endo_N; tRNA intron endonuclease, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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