LOC542323 acidic ribosomal protein P2a [Zea mays] - Gene

Summary

Gene symbol: LOC542323
Gene description: acidic ribosomal protein P2a
Locus tag: ZEAMMB73_Zm00001d009653
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Zea mays
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as: rpp2; RPP2A; rpl12; arpp2a; RPA-2A1; GRMZM2G119809
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Genomic context

Location:: chromosome: 8

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
103	current	Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1)	8	NC_050103.1 (74774672..74776862)
102.20200423	previous assembly	B73 RefGen_v4 (GCF_000005005.2)	8	NC_024466.2 (74612614..74614775)

Chromosome 8 - NC_050103.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

the P2 binding site on ribosome-inactivating protein (MOD) is located at the N-terminal domain near the internal inactivation region
Title: Solution structure of an active mutant of maize ribosome-inactivating protein (MOD) and its interaction with the ribosomal stalk protein P2.

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cytoplasmic translational elongation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of cytosolic large ribosomal subunit	IEA Inferred from Electronic Annotation more info	PubMed
located_in ribosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: large ribosomal subunit protein P2A; 60S acidic ribosomal protein P2A

Names: 5C06C03; P2; PCO075293; PCO075293b; acidic ribosomal protein P2; arpp2a*-X86553; arpp2a*-uaz5c06c03; rp2; rpa*-uaz5c06c03; rpa2-1; rpl12*-X86553; rpl12*-uaz5c06c03; rpp*-uaz5c06c03; uaz294; uaz5c06c03(gfu); uaz5c06c03(rpl12)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001111907.2 → NP_001105377.1 large ribosomal subunit protein P2A

See identical proteins and their annotated locations for NP_001105377.1

Status: PROVISIONAL

Source sequence(s)

U29383

UniProtKB/Swiss-Prot

P46252

UniProtKB/TrEMBL

B6SIG8

Conserved Domains (1) summary

cd05833
Location:1 → 112

Ribosomal_P2; Ribosomal protein P2. This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins ...

RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

NC_050103.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Range

74774672..74776862

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_008657205.3 → XP_008655427.1 60S acidic ribosomal protein P2A isoform X1

See identical proteins and their annotated locations for XP_008655427.1

UniProtKB/Swiss-Prot

P46252

UniProtKB/TrEMBL

B6SIG8, C4IYY6

Conserved Domains (1) summary

cd05833
Location:1 → 112

Ribosomal_P2; Ribosomal protein P2. This subfamily represents the eukaryotic large ribosomal protein P2. Eukaryotic P1 and P2 are functionally equivalent to the bacterial protein L7/L12, but are not homologous to L7/L12. P2 is located in the L12 stalk, with proteins ...