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    LOC542997 xylanase inhibitor protein 1-like [ Triticum aestivum (bread wheat) ]

    Gene ID: 542997, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC542997
    Gene description
    xylanase inhibitor protein 1-like
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Triticum aestivum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
    Also known as
    xip; xipI; XIP-1; XIP-I
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    Genomic context

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    See LOC542997 in Genome Data Viewer
    Location:
    chromosome: 4D
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 4D NC_057805.1 (127386759..127387870)

    Chromosome 4D - NC_057805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123096809 Neighboring gene uncharacterized LOC123096810 Neighboring gene uncharacterized LOC123096811 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At4g29180

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057805.1 Chromosome 4D Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A wheat xylanase inhibitor gene, Xip-I, but not Taxi-I, is significantly induced by biotic and abiotic signals that trigger plant defense. Igawa T, et al. Biosci Biotechnol Biochem, 2005 May. PMID 15914935
    2. The dual nature of the wheat xylanase protein inhibitor XIP-I: structural basis for the inhibition of family 10 and family 11 xylanases. Payan F, et al. J Biol Chem, 2004 Aug 20. PMID 15181003
    3. Cross-inhibitory activity of cereal protein inhibitors against alpha-amylases and xylanases. Sancho AI, et al. Biochim Biophys Acta, 2003 Aug 21. PMID 12922177
    4. Structural analysis of xylanase inhibitor protein I (XIP-I), a proteinaceous xylanase inhibitor from wheat (Triticum aestivum, var. Soisson). Payan F, et al. Biochem J, 2003 Jun 1. PMID 12617724, Free PMC Article
    5. Functional identification of the cDNA coding for a wheat endo-1,4-beta-D-xylanase inhibitor. Elliott GO, et al. FEBS Lett, 2002 May 22. PMID 12023019

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    xylanase inhibitor protein 1
    Names
    Xylanase inhibitor protein 1
    class III chitinase homolog
    xylanase inhibitor protein I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001405501.1 → NP_001392430.1  xylanase inhibitor protein 1 precursor

      Status: VALIDATED

      Source sequence(s)
      AK453158, CD922583
      UniProtKB/Swiss-Prot
      Q8L5C6
      UniProtKB/TrEMBL
      R9UNY9

    RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Genomic

    1. NC_057805.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

      Range
      127386759..127387870
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044518582.1 → XP_044374517.1  xylanase inhibitor protein 1

      Conserved Domains (1) summary
      cd02877
      Location:36 → 302
      GH18_hevamine_XipI_class_III; This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L5C6.2 GenPept UniProtKB/Swiss-Prot:Q8L5C6

    Gene LinkOut

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