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    HCAG_07898 hypothetical protein [ Histoplasma mississippiense (nom. inval.) ]

    Gene ID: 5443802, updated on 17-May-2024

    Summary

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    Gene symbol
    HCAG_07898
    Gene description
    hypothetical protein
    Locus tag
    HCAG_07898
    See related
    FungiDB:HCAG_07898; VEuPathDB:HCAG_07898
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Histoplasma mississippiense (nom. inval.) (strain: NAm1)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
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    Genomic context

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    See HCAG_07898 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    9

    NW_001813974.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001813974.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001813974.1 Reference assembly

      Range
      1413093..1418378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001537532.1 → XP_001537582.1  predicted protein [Histoplasma mississippiense (nom. inval.)]

      See identical proteins and their annotated locations for XP_001537582.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A6RE33
      Conserved Domains (2) summary
      pfam03221
      Location:724 → 783
      HTH_Tnp_Tc5; Tc5 transposase DNA-binding domain
      cl21549
      Location:861 → 1029
      rve; Integrase core domain
    Protein Accession Links
    GenPept Link UniProtKB Link
    EDN11438.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials