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    Bm367 cystatin [ Brugia malayi ]

    Gene ID: 6098930, updated on 7-Dec-2023

    Summary

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    Gene symbol
    Bm367
    Gene description
    cystatin
    Locus tag
    BM_BM367
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Brugia malayi (strain: FR3)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Spirurina; Spiruromorpha; Filarioidea; Onchocercidae; Brugia
    Old locus tag
    Bm1_20105
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    Genomic context

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    See Bm367 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_025062478.1Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Mitotic checkpoint protein BUB3, putative Neighboring gene cystatin, putative Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025062478.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome of the filarial nematode parasite Brugia malayi. Ghedin E, et al. Science, 2007 Sep 21. PMID 17885136, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cystatin
    XP_001895476.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_025062478.1 Reference assembly

      Range
      12247720..12248728 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001895441.2 → XP_001895476.1  cystatin [Brugia malayi]

      See identical proteins and their annotated locations for XP_001895476.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A0A0K0JBB7, P90698
      UniProtKB/TrEMBL
      A0A4E9FQN8
      Conserved Domains (1) summary
      cd00042
      Location:30 → 125
      CY; Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P90698.1

    Gene LinkOut

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