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    Ufl1 UFM1 specific ligase 1 [ Drosophila mojavensis ]

    Gene ID: 6572236, updated on 23-May-2024

    Summary

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    Gene symbol
    Ufl1
    Gene description
    UFM1 specific ligase 1
    Locus tag
    Dmoj_GI23931
    See related
    EnsemblRapid:LOC6572236
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila mojavensis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    GI23931; GI23931-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See Ufl1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    102 current ASM1815372v1 (GCF_018153725.1) Unplaced Scaffold NW_025318726.1 (2964304..2967332, complement)
    101 previous assembly dmoj_caf1 (GCF_000005175.2) Unplaced Scaffold NW_001979112.1 (3688002..3690963)

    NW_025318726.1Genomic Context describing neighboring genes Neighboring gene nuclear envelope pore membrane protein POM 121 Neighboring gene C-terminal Src kinase Neighboring gene PAX3- and PAX7-binding protein 1 Neighboring gene Kip1 ubiquitination-promoting complex subunit 1 Neighboring gene Guanylyl cyclase at 88E Neighboring gene uncharacterized LOC6572233 Neighboring gene uncharacterized LOC122756859

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UFM1 ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K69-linked ufmylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to endoplasmic reticulum stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 UFM1-protein ligase 1 homolog
    Names
    Dmoj\GI23931
    Dmoj\GI23931-PA
    E3 UFM1-protein transferase 1 homolog
    dmoj_GLEANR_9121

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila mojavensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815372v1

    Genomic

    1. NW_025318726.1 Reference ASM1815372v1

      Range
      2964304..2967332 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001998342.4 → XP_001998378.1  E3 UFM1-protein ligase 1 homolog

      See identical proteins and their annotated locations for XP_001998378.1

      UniProtKB/Swiss-Prot
      B4KDK5
      Related
      XP_001998378.1, XM_001998342.4
      Conserved Domains (2) summary
      pfam09743
      Location:7 → 271
      DUF2042; Uncharacterized conserved protein (DUF2042)
      pfam11595
      Location:401 → 479
      DUF3245; Protein of unknown function (DUF3245)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4KDK5.1 GenPept UniProtKB/Swiss-Prot:B4KDK5

    Gene LinkOut

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