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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference icTriCast1.1 Primary Assembly
Genomic
-
NC_087398.1 Reference icTriCast1.1 Primary Assembly
- Range
-
7266305..7285747 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_008195445.3 → XP_008193667.1 chromodomain-helicase-DNA-binding protein 7 isoform X3
- Conserved Domains (11) summary
-
- PHA03160
Location:302 → 424
- PHA03160; hypothetical protein; Provisional
- smart00298
Location:1435 → 1477
- CHROMO; Chromatin organization modifier domain
- COG0553
Location:1368 → 2084
- HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
- cd00046
Location:1604 → 1753
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:823 → 926
- Forkhead_N; Forkhead N-terminal region
- pfam00271
Location:1905 → 2020
- Helicase_C; Helicase conserved C-terminal domain
- pfam00385
Location:1497 → 1552
- Chromo; Chromo (CHRromatin Organization MOdifier) domain
- pfam02948
Location:223 → 383
- Amelogenin; Amelogenin
- pfam03529
Location:175 → 259
- TF_Otx; Otx1 transcription factor
- pfam07533
Location:3462 → 3502
- BRK; BRK domain
- pfam09309
Location:978 → 1162
- FCP1_C; FCP1, C-terminal
-
XM_064357166.1 → XP_064213236.1 chromodomain-helicase-DNA-binding protein 7 isoform X4
-
XM_008195443.3 → XP_008193665.1 chromodomain-helicase-DNA-binding protein 7 isoform X1
See identical proteins and their annotated locations for XP_008193665.1
- UniProtKB/TrEMBL
-
D6WL05
- Conserved Domains (11) summary
-
- PHA03160
Location:302 → 424
- PHA03160; hypothetical protein; Provisional
- smart00298
Location:1435 → 1477
- CHROMO; Chromatin organization modifier domain
- COG0553
Location:1368 → 2084
- HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
- cd00046
Location:1604 → 1753
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:823 → 926
- Forkhead_N; Forkhead N-terminal region
- pfam00271
Location:1905 → 2020
- Helicase_C; Helicase conserved C-terminal domain
- pfam00385
Location:1497 → 1552
- Chromo; Chromo (CHRromatin Organization MOdifier) domain
- pfam02948
Location:223 → 383
- Amelogenin; Amelogenin
- pfam03529
Location:175 → 259
- TF_Otx; Otx1 transcription factor
- pfam07533
Location:3480 → 3520
- BRK; BRK domain
- pfam09309
Location:978 → 1162
- FCP1_C; FCP1, C-terminal
-
XM_008195446.3 → XP_008193668.1 chromodomain-helicase-DNA-binding protein 7 isoform X5
- UniProtKB/TrEMBL
-
A0A139WGY5
- Conserved Domains (11) summary
-
- PHA03160
Location:302 → 424
- PHA03160; hypothetical protein; Provisional
- smart00298
Location:1435 → 1477
- CHROMO; Chromatin organization modifier domain
- COG0553
Location:1368 → 2084
- HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
- cd00046
Location:1604 → 1753
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:823 → 926
- Forkhead_N; Forkhead N-terminal region
- pfam00271
Location:1905 → 2020
- Helicase_C; Helicase conserved C-terminal domain
- pfam00385
Location:1497 → 1552
- Chromo; Chromo (CHRromatin Organization MOdifier) domain
- pfam02948
Location:223 → 383
- Amelogenin; Amelogenin
- pfam03529
Location:175 → 259
- TF_Otx; Otx1 transcription factor
- pfam07533
Location:3406 → 3446
- BRK; BRK domain
- pfam09309
Location:978 → 1162
- FCP1_C; FCP1, C-terminal
-
XM_008195444.3 → XP_008193666.1 chromodomain-helicase-DNA-binding protein 7 isoform X2
- UniProtKB/TrEMBL
-
A0A139WGN7
- Conserved Domains (11) summary
-
- PHA03160
Location:302 → 424
- PHA03160; hypothetical protein; Provisional
- smart00298
Location:1435 → 1477
- CHROMO; Chromatin organization modifier domain
- COG0553
Location:1368 → 2084
- HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
- cd00046
Location:1604 → 1753
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:823 → 926
- Forkhead_N; Forkhead N-terminal region
- pfam00271
Location:1905 → 2020
- Helicase_C; Helicase conserved C-terminal domain
- pfam00385
Location:1497 → 1552
- Chromo; Chromo (CHRromatin Organization MOdifier) domain
- pfam02948
Location:223 → 383
- Amelogenin; Amelogenin
- pfam03529
Location:175 → 259
- TF_Otx; Otx1 transcription factor
- pfam07533
Location:3462 → 3502
- BRK; BRK domain
- pfam09309
Location:978 → 1162
- FCP1_C; FCP1, C-terminal
-
XM_064357165.1 → XP_064213235.1 chromodomain-helicase-DNA-binding protein 7 isoform X1
- UniProtKB/TrEMBL
-
D6WL05