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    LOC6608743 tyrosine-protein kinase-like otk [ Drosophila sechellia ]

    Gene ID: 6608743, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6608743
    Gene description
    tyrosine-protein kinase-like otk
    Locus tag
    Dsec_GM20393
    See related
    EnsemblRapid:LOC6608743
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila sechellia
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    otk; GM20393; GM20393-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6608743 in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current ASM438219v1 (GCF_004382195.1) 2R NC_045950.1 (8160010..8177942, complement)

    Chromosome 2R - NC_045950.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 48 Neighboring gene glycerol kinase Neighboring gene rhomboid family intramembrane serine protease rho-7 Neighboring gene tyrosine-protein kinase-like otk Neighboring gene metallophosphoesterase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045950.1 Chromosome 2R Reference ASM438219v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cell-cell adhesion mediator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dendrite self-avoidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tyrosine-protein kinase-like otk
    Names
    Dsec\GM20393
    Dsec\GM20393-PA
    Tyrosine-protein kinase-like 7 homolog
    dsec_GLEANR_3216

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila sechellia Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438219v1

    Genomic

    1. NC_045950.1 Reference ASM438219v1

      Range
      8160010..8177942 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002033430.2 → XP_002033466.2  tyrosine-protein kinase-like otk

      UniProtKB/Swiss-Prot
      B4HNW4
      Related
      XP_002033466.2, XM_002033430.2
      Conserved Domains (5) summary
      cd05046
      Location:686 → 1026
      PTK_CCK4; Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4
      pfam07679
      Location:468 → 559
      I-set; Immunoglobulin I-set domain
      pfam13927
      Location:31 → 99
      Ig_3; Immunoglobulin domain
      cd00096
      Location:468 → 471
      Ig; Ig strand A [structural motif]
      cl11960
      Location:364 → 464
      Ig; Immunoglobulin domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4HNW4.1 GenPept UniProtKB/Swiss-Prot:B4HNW4

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials