U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Hspbp1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [ Mus musculus (house mouse) ]

    Gene ID: 66245, updated on 2-Nov-2024

    Summary

    Official Symbol
    Hspbp1provided by MGI
    Official Full Name
    HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1provided by MGI
    Primary source
    MGI:MGI:1913495
    See related
    Ensembl:ENSMUSG00000063802 AllianceGenome:MGI:1913495
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1500019G21Rik
    Summary
    Predicted to enable adenyl-nucleotide exchange factor activity; molecular sequestering activity; and ubiquitin protein ligase binding activity. Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and positive regulation of protein ubiquitination. Predicted to be active in endoplasmic reticulum and extracellular space. Is expressed in dentate gyrus subgranular zone. Orthologous to human HSPBP1 (HSPA (Hsp70) binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in ovary adult (RPKM 24.7), adrenal adult (RPKM 23.2) and 28 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Hspbp1 in Genome Data Viewer
    Location:
    7 A1; 7 2.69 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (4663514..4688218, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (4660515..4685188, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 86B Neighboring gene protein phosphatase 6, regulatory subunit 1 Neighboring gene ribosomal protein L7A pseudogene Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:4605526-4605679 Neighboring gene STARR-positive B cell enhancer ABC_E3695 Neighboring gene STARR-positive B cell enhancer ABC_E2219 Neighboring gene BR serine/threonine kinase 1 Neighboring gene transmembrane protein 150B Neighboring gene predicted gene, 24537

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (1)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables adenyl-nucleotide exchange factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables molecular sequestering activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables molecular sequestering activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ubiquitin protein ligase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    hsp70-binding protein 1
    Names
    SPA ) binding protein, cytoplasmic cochaperone 1
    heat shock protein-binding protein 1
    hsp70-interacting protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360629.1NP_001347558.1  hsp70-binding protein 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AC161197
      Consensus CDS
      CCDS20740.1
      UniProtKB/Swiss-Prot
      Q99P31, Q9CYV8
      Conserved Domains (2) summary
      sd00043
      Location:135172
      ARM; armadillo repeat [structural motif]
      pfam08609
      Location:43137
      Fes1; Nucleotide exchange factor Fes1
    2. NM_024172.4NP_077134.1  hsp70-binding protein 1

      See identical proteins and their annotated locations for NP_077134.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AC161197
      Consensus CDS
      CCDS20740.1
      UniProtKB/Swiss-Prot
      Q99P31, Q9CYV8
      Related
      ENSMUSP00000078886.5, ENSMUST00000079970.6
      Conserved Domains (2) summary
      sd00043
      Location:135172
      ARM; armadillo repeat [structural motif]
      pfam08609
      Location:43137
      Fes1; Nucleotide exchange factor Fes1

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      4663514..4688218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030242890.2XP_030098750.1  hsp70-binding protein 1 isoform X1

      UniProtKB/Swiss-Prot
      Q99P31, Q9CYV8
      Conserved Domains (2) summary
      sd00043
      Location:135172
      ARM; armadillo repeat [structural motif]
      pfam08609
      Location:43137
      Fes1; Nucleotide exchange factor Fes1