NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001242805.2 → NP_001229734.2 bromodomain testis-specific protein isoform b
See identical proteins and their annotated locations for NP_001229734.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and uses an alternate in-frame splice junction at the 3' end of an exon compared to variant 4. The resulting isoform (b) lacks a short internal segment compared to isoform a. Variants 1, 2, and 3 all encode the same isoform (b).
- Source sequence(s)
-
AC114486, AK302758, AK303008, AY338951, BX648135
- Consensus CDS
-
CCDS735.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Related
- ENSP00000354568.3, ENST00000362005.7
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
NM_001242806.2 → NP_001229735.2 bromodomain testis-specific protein isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) encodes the longest isoform (a).
- Source sequence(s)
-
AC114486, AK302758, AK303008, AY338951, BX648135, DB072781
- UniProtKB/Swiss-Prot
-
Q58F21
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:276 → 377
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:513 → 575
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:909 → 951
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
NM_001242807.2 → NP_001229736.2 bromodomain testis-specific protein isoform c
See identical proteins and their annotated locations for NP_001229736.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks an alternate in-frame exon, and uses an alternate in-frame splice junction at the 3' end of an exon compared to variant 4. The resulting isoform (c) lacks two internal segments compared to isoform a. Variants 5 and 6 both encode the same protein.
- Source sequence(s)
-
AK302758, AK316442, AY338951, BX648135, DC402057
- Consensus CDS
-
CCDS55615.1
- UniProtKB/Swiss-Prot
-
Q58F21
- Conserved Domains (4) summary
-
- cd05498
Location:226 → 327
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:463 → 525
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:859 → 901
- BRD4_CDT; C-terminal domain of bromodomain protein 4
- cl02556
Location:27 → 87
- Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_001242808.2 → NP_001229737.2 bromodomain testis-specific protein isoform c
See identical proteins and their annotated locations for NP_001229737.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks an alternate in-frame exon and uses an alternate in-frame splice junction at the 3' end of an exon compared to variant 4. The resulting isoform (c) lacks two internal segments compared to isoform a. Variants 5 and 6 both encode the same protein.
- Source sequence(s)
-
AC114486, AK302758, AY338951, BX648135
- Consensus CDS
-
CCDS55615.1
- UniProtKB/Swiss-Prot
-
Q58F21
- Related
- ENSP00000378038.3, ENST00000394530.7
- Conserved Domains (4) summary
-
- cd05498
Location:226 → 327
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:463 → 525
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:859 → 901
- BRD4_CDT; C-terminal domain of bromodomain protein 4
- cl02556
Location:27 → 87
- Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_001242810.2 → NP_001229739.2 bromodomain testis-specific protein isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) differs in the 5' UTR and coding sequence compared to variant 4. The resulting isoform (d) is shorter at the N-terminus and lacks a short internal segment compared to isoform a.
- Source sequence(s)
-
AC114486, AK302758, AY338951, BX648135
- Consensus CDS
-
CCDS55616.1
- UniProtKB/Swiss-Prot
-
Q58F21
- Related
- ENSP00000359416.2, ENST00000370389.6
- Conserved Domains (4) summary
-
- cd05498
Location:199 → 300
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:436 → 498
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:832 → 874
- BRD4_CDT; C-terminal domain of bromodomain protein 4
- cl02556
Location:1 → 60
- Bromodomain; Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_001726.4 → NP_001717.3 bromodomain testis-specific protein isoform b
See identical proteins and their annotated locations for NP_001717.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and uses an alternate in-frame splice junction at the 3' end of an exon compared to variant 4. The resulting isoform (b) lacks a short internal segment compared to isoform a. Variants 1, 2, and 3 all encode the same isoform (b).
- Source sequence(s)
-
AK302758, AY338951, BC047900, BX648135, DC401352
- Consensus CDS
-
CCDS735.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Related
- ENSP00000384051.1, ENST00000402388.1
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
NM_207189.4 → NP_997072.2 bromodomain testis-specific protein isoform b
See identical proteins and their annotated locations for NP_997072.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) differs in the 5' UTR and uses an alternate in-frame splice junction at the 3' end of an exon compared to variant 4. The resulting isoform (b) lacks a short internal segment compared to isoform a. Variants 1, 2, and 3 all encode the same isoform (b).
- Source sequence(s)
-
AC114486
- Consensus CDS
-
CCDS735.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Related
- ENSP00000387822.3, ENST00000399546.7
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
91949371..92014428
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006710855.5 → XP_006710918.1 bromodomain testis-specific protein isoform X1
See identical proteins and their annotated locations for XP_006710918.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
XM_011542032.4 → XP_011540334.1 bromodomain testis-specific protein isoform X1
See identical proteins and their annotated locations for XP_011540334.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
XM_011542034.4 → XP_011540336.1 bromodomain testis-specific protein isoform X1
See identical proteins and their annotated locations for XP_011540336.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
XM_047428949.1 → XP_047284905.1 bromodomain testis-specific protein isoform X1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
-
XM_006710856.5 → XP_006710919.1 bromodomain testis-specific protein isoform X1
See identical proteins and their annotated locations for XP_006710919.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
XM_011542035.4 → XP_011540337.1 bromodomain testis-specific protein isoform X1
See identical proteins and their annotated locations for XP_011540337.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
-
XM_047428955.1 → XP_047284911.1 bromodomain testis-specific protein isoform X1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
-
XM_047428967.1 → XP_047284923.1 bromodomain testis-specific protein isoform X1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
-
XM_011542036.4 → XP_011540338.1 bromodomain testis-specific protein isoform X1
See identical proteins and their annotated locations for XP_011540338.1
- UniProtKB/Swiss-Prot
- A6NF68, B7Z811, B7Z890, B7ZAX7, D3DT32, O14789, Q05DQ4, Q58F21, Q6P5T1, Q7Z4A6, Q8IWI6
- Conserved Domains (4) summary
-
- cd05497
Location:27 → 133
- Bromo_Brdt_I_like; Bromodomain, Brdt_like subfamily, repeat I. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- cd05498
Location:272 → 373
- Bromo_Brdt_II_like; Bromodomain, Brdt_like subfamily, repeat II. Human Brdt is a testis-specific member of the BET subfamily of bromodomain proteins; the first bromodomain in Brdt has been shown to be essential for male germ cell differentiation. Bromodomains are 110 amino ...
- pfam17035
Location:509 → 571
- BET; Bromodomain extra-terminal - transcription regulation
- pfam17105
Location:905 → 947
- BRD4_CDT; C-terminal domain of bromodomain protein 4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
91794237..91859235
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054338477.1 → XP_054194452.1 bromodomain testis-specific protein isoform X1
-
XM_054338479.1 → XP_054194454.1 bromodomain testis-specific protein isoform X1
-
XM_054338484.1 → XP_054194459.1 bromodomain testis-specific protein isoform X1
-
XM_054338481.1 → XP_054194456.1 bromodomain testis-specific protein isoform X1
-
XM_054338478.1 → XP_054194453.1 bromodomain testis-specific protein isoform X1
-
XM_054338482.1 → XP_054194457.1 bromodomain testis-specific protein isoform X1
-
XM_054338483.1 → XP_054194458.1 bromodomain testis-specific protein isoform X1
-
XM_054338480.1 → XP_054194455.1 bromodomain testis-specific protein isoform X1