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    RIPPLY1 ripply transcriptional repressor 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 738806, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RIPPLY1provided by VGNC
    Official Full Name
    ripply transcriptional repressor 1provided by VGNC
    Primary source
    VGNC:VGNC:1207
    Locus tag
    CK820_G0042058
    See related
    Ensembl:ENSPTRG00000022155
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    See RIPPLY1 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (104392265..104398511, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (104388349..104394594, complement)

    Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene ring finger protein 128 Neighboring gene TBC1 domain family member 8B Neighboring gene claudin 2 Neighboring gene MORC family CW-type zinc finger 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in embryonic pattern specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ripply1
    Names
    ripply1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      104392265..104398511 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001143526.6 → XP_001143526.1  protein ripply1

      UniProtKB/TrEMBL
      A0A2J8K3M0, A0A6D2Y5B4, H2R4L9
      Related
      ENSPTRP00000047318.3
      Conserved Domains (1) summary
      pfam14998
      Location:56 → 131
      Ripply; Transcription Regulator
    Nucleotide Protein
    Heading Accession and Version

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