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    slc35c2 solute carrier family 35 member C2 [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 763619, updated on 17-Aug-2024

    Summary

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    Symbol
    slc35c2
    Full Name
    solute carrier family 35 member C2
    Primary source
    EchinoBase:ECB-GENE-23068698
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    See slc35c2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145599.1 (22497398..22510554, complement)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577443.1 (505903..521768, complement)

    NW_022145599.1Genomic Context describing neighboring genes Neighboring gene arf-GAP with dual PH domain-containing protein 1 Neighboring gene transmembrane protein 70, mitochondrial Neighboring gene solute carrier organic anion transporter family member 4A1-like Neighboring gene BTB/POZ domain-containing protein KCTD5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in UDP-glucose transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cis-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum-Golgi intermediate compartment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 35 member C2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145599.1 Reference Spur_5.0 Primary Assembly

      Range
      22497398..22510554 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030984483.1 → XP_030840343.1  solute carrier family 35 member C2

      UniProtKB/TrEMBL
      A0A7M7NQV2
      Conserved Domains (1) summary
      cl26744
      Location:41 → 338
      TPT; Triose-phosphate Transporter family

    2. XM_030984484.1 → XP_030840344.1  solute carrier family 35 member C2

      UniProtKB/TrEMBL
      A0A7M7NQV2
      Conserved Domains (1) summary
      cl26744
      Location:41 → 338
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version

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