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    LOC780594 phosphomannomutase-like [ Triticum aestivum (bread wheat) ]

    Gene ID: 780594, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC780594
    Gene description
    phosphomannomutase-like
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Triticum aestivum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
    Also known as
    PMM; TaPMM; PMM-A1
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    Genomic context

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    See LOC780594 in Genome Data Viewer
    Location:
    chromosome: 2A
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current IWGSC CS RefSeq v2.1 (GCF_018294505.1) 2A NC_057797.1 (770335342..770338164)

    Chromosome 2A - NC_057797.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon CGU) Neighboring gene uncharacterized LOC123186622 Neighboring gene F-box protein At4g22280-like Neighboring gene uncharacterized LOC123191090

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057797.1 Chromosome 2A Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular analysis of phosphomannomutase (PMM) genes reveals a unique PMM duplication event in diverse Triticeae species and the main PMM isozymes in bread wheat tissues. Yu C, et al. BMC Plant Biol, 2010 Oct 5. PMID 20920368, Free PMC Article
    2. Molecular and functional analysis of phosphomannomutase (PMM) from higher plants and genetic evidence for the involvement of PMM in ascorbic acid biosynthesis in Arabidopsis and Nicotiana benthamiana. Qian W, et al. Plant J, 2007 Feb. PMID 17217471
    3. Tissue expression map of a large number of expressed sequence tags and its application to in silico screening of stress response genes in common wheat. Mochida K, et al. Mol Genet Genomics, 2006 Sep. PMID 16832693
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Data indicate that TaPMM-A1, B1 and D1 were probably the main active isozymes in bread wheat tissues.
      Title: Molecular analysis of phosphomannomutase (PMM) genes reveals a unique PMM duplication event in diverse Triticeae species and the main PMM isozymes in bread wheat tissues.
    Submit: New GeneRIF Correction

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphomannomutase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GDP-mannose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mannose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphomannomutase
    Names
    phosphomannomutase A1
    XP_044459795.1
    XP_044459796.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001428022.1 → NP_001414951.1  phosphomannomutase

      Status: VALIDATED

      Source sequence(s)
      CJ495888, GILY01050464, HAAB01034460
      UniProtKB/TrEMBL
      A0A3B6U9T2

    RefSeqs of Annotated Genomes: Triticum aestivum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IWGSC CS RefSeq v2.1 Primary Assembly

    Genomic

    1. NC_057797.1 Reference IWGSC CS RefSeq v2.1 Primary Assembly

      Range
      770335342..770338164
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044603860.1 → XP_044459795.1  phosphomannomutase isoform X1

      UniProtKB/TrEMBL
      C8CK07
      Conserved Domains (1) summary
      PLN02423
      Location:7 → 280
      PLN02423; phosphomannomutase

    2. XM_044603861.1 → XP_044459796.1  phosphomannomutase isoform X2

      Conserved Domains (1) summary
      PLN02423
      Location:7 → 249
      PLN02423; phosphomannomutase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1W374.1 GenPept UniProtKB/Swiss-Prot:Q1W374

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases