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    PF3D7_1205800 high mobility group protein B3, putative [ Plasmodium falciparum 3D7 ]

    Gene ID: 811111, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1205800
    Gene description
    high mobility group protein B3, putative
    Locus tag
    PF3D7_1205800
    See related
    PlasmoDB:PF3D7_1205800; VEuPathDB:PF3D7_1205800
    Gene type
    protein coding
    RNA name
    high mobility group protein B3, putative
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Orthologs
    all
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    Genomic context

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    See PF3D7_1205800 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Sequence:
    Chromosome: 12; NC_037284.1 (256367..263731)

    Chromosome 12 - NC_037284.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein, putative Neighboring gene targeted glyoxalase II Neighboring gene conserved protein, unknown function Neighboring gene shewanella-like protein phosphatase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037284.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
    2. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    high mobility group protein B3, putative

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037284.1 Reference assembly

      Range
      256367..263731
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001350431.1 → XP_001350467.1  high mobility group protein B3, putative [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001350467.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0L7KGM2, A0A2I0BYI3, Q8I5Y7
      Conserved Domains (2) summary
      cd00084
      Location:826 → 885
      HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
      pfam15963
      Location:2135 → 2215
      Myb_DNA-bind_7; Myb DNA-binding like
    Nucleotide Protein
    Heading Accession and Version

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