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    PF3D7_1446400 pyruvate dehydrogenase E1 component subunit beta [ Plasmodium falciparum 3D7 ]

    Gene ID: 812023, updated on 17-May-2024

    Summary

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    Gene symbol
    PF3D7_1446400
    Gene description
    pyruvate dehydrogenase E1 component subunit beta
    Primary source
    PlasmoDB:PF3D7_1446400
    Locus tag
    PF3D7_1446400
    See related
    VEuPathDB:PF3D7_1446400
    Gene type
    protein coding
    RNA name
    pyruvate dehydrogenase E1 component subunit beta
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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    Genomic context

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    See PF3D7_1446400 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    1
    Sequence:
    Chromosome: 14; NC_037283.1 (1902916..1904163, complement)

    Chromosome 14 - NC_037283.1Genomic Context describing neighboring genes Neighboring gene M17 leucyl aminopeptidase Neighboring gene conserved Plasmodium membrane protein, unknown function Neighboring gene nucleoporin NUP313, putative Neighboring gene centrin-2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037283.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The malaria parasite Plasmodium falciparum has only one pyruvate dehydrogenase complex, which is located in the apicoplast. Foth BJ, et al. Mol Microbiol, 2005 Jan. PMID 15612915
    2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Component Evidence Code Pubs
    located_in apicoplast HDA PubMed 
    located_in apicoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of pyruvate dehydrogenase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyruvate dehydrogenase E1 component subunit beta
    XP_001348615.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037283.1 Reference assembly

      Range
      1902916..1904163 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001348579.2 → XP_001348615.2  pyruvate dehydrogenase E1 component subunit beta [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001348615.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024V0G0, A0A024VZV8, A0A024WI19, A0A024X049, A0A0L1IDP7, Q5VGY3, Q8IL09, W4I7X7, W4IVR2, W7EU82, W7FHG6, W7JXV5
      Conserved Domains (1) summary
      PTZ00182
      Location:58 → 411
      PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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