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    PAS_chr2-2_0016 Histone deacetylase [ Komagataella phaffii GS115 ]

    Gene ID: 8198253, updated on 25-Jan-2024

    Summary

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    Gene symbol
    PAS_chr2-2_0016
    Gene description
    Histone deacetylase
    Locus tag
    PAS_chr2-2_0016
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    See PAS_chr2-2_0016 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_012964.1 (2363444..2364832)

    Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene Apyrase with wide substrate specificity Neighboring gene uncharacterized protein Neighboring gene One of several homologs of bacterial chaperone DnaJ, located in the ER lumen Neighboring gene Guanyl-nucleotide exchange factor for the small G-protein Sec4p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012964.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone deacetylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Histone deacetylase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012964.1 Reference assembly

      Range
      2363444..2364832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002492156.1 → XP_002492201.1  Histone deacetylase [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002492201.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C4R347, F2QQN2
      Conserved Domains (1) summary
      cl17011
      Location:35 → 415
      Arginase_HDAC; Arginase-like and histone-like hydrolases
    Nucleotide Protein
    Heading Accession and Version

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