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    Cbr-lev-11 Protein CBR-LEV-11 [ Caenorhabditis briggsae ]

    Gene ID: 8582720, updated on 6-Jun-2024

    Summary

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    Gene symbol
    Cbr-lev-11
    Gene description
    Protein CBR-LEV-11
    Locus tag
    CBG_19793
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Caenorhabditis briggsae (strain: AF16)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Cbr-lev-11 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    12
    Sequence:
    Chromosome: I; NC_013489.2 (15116723..15124498, complement)

    Chromosome I - NC_013489.2Genomic Context describing neighboring genes Neighboring gene Protein CBG19792 Neighboring gene Protein CBG25430 Neighboring gene Protein CBR-EXOC-8 Neighboring gene Protein CBG19797

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013489.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Protein CBR-LEV-11
    XP_002640725.1
    • C. briggsae CBR-LEV-11 protein; contains similarity to Pfam domain PF12718 Tropomyosin like contains similarity to Interpro domain IPR000533 (Tropomyosin);
      Partially confirmed by transcript evidence
    XP_002640726.1
    • C. briggsae CBR-LEV-11 protein; contains similarity to Interpro domain IPR000533 (Tropomyosin);
      Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013489.2 Reference assembly

      Range
      15116723..15124498 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002640679.1 → XP_002640725.1  Protein CBR-LEV-11, isoform b [Caenorhabditis briggsae]

      See identical proteins and their annotated locations for XP_002640725.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0AAE9J4Q1, H8WHA8
      Conserved Domains (1) summary
      pfam00261
      Location:48 → 282
      Tropomyosin; Tropomyosin

    2. XM_002640680.1 → XP_002640726.1  Protein CBR-LEV-11, isoform a [Caenorhabditis briggsae]

      See identical proteins and their annotated locations for XP_002640726.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A8XWA7, H8WHA7, Q60UW4
      UniProtKB/TrEMBL
      A0AAE9E4W6, A0AAE9J591
      Conserved Domains (1) summary
      pfam00261
      Location:20 → 254
      Tropomyosin; Tropomyosin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q60UW4.1

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