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    NAEGRDRAFT_33477 uncharacterized protein [ Naegleria gruberi ]

    Gene ID: 8848483, updated on 17-May-2024

    Summary

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    Gene symbol
    NAEGRDRAFT_33477
    Gene description
    uncharacterized protein
    Locus tag
    NAEGRDRAFT_33477
    See related
    AmoebaDB:NAEGRDRAFT_33477; VEuPathDB:NAEGRDRAFT_33477
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Naegleria gruberi (strain: NEG-M)
    Lineage
    Eukaryota; Discoba; Heterolobosea; Tetramitia; Eutetramitia; Vahlkampfiidae; Naegleria
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    Genomic context

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    See NAEGRDRAFT_33477 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_003163304.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003163304.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of Naegleria gruberi illuminates early eukaryotic versatility. Fritz-Laylin LK, et al. Cell, 2010 Mar 5. PMID 20211133
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U2 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U4 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of U5 snRNP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003163304.1 Reference assembly

      Range
      23090..23405
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002677233.1 → XP_002677279.1  uncharacterized protein NAEGRDRAFT_33477 [Naegleria gruberi]

      See identical proteins and their annotated locations for XP_002677279.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D2VEN8
      Conserved Domains (1) summary
      cd01718
      Location:5 → 82
      Sm_E; Sm protein E
    Nucleotide Protein
    Heading Accession and Version

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