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    LOC9643489 ubiquitin-like domain-containing CTD phosphatase [ Selaginella moellendorffii ]

    Gene ID: 9643489, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC9643489
    Gene description
    ubiquitin-like domain-containing CTD phosphatase
    Locus tag
    SELMODRAFT_79490
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Selaginella moellendorffii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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    Genomic context

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    See LOC9643489 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314264.1 (2221664..2223228)

    NW_003314264.1Genomic Context describing neighboring genes Neighboring gene chaperone protein dnaJ 72-like Neighboring gene uncharacterized LOC9655216 Neighboring gene uncharacterized LOC9655217 Neighboring gene cation/H(+) antiporter 18 Neighboring gene DNA (cytosine-5)-methyltransferase 1B Neighboring gene EIN3-binding F-box protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003314264 Unplaced Scaffold Reference v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphoprotein phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ubiquitin-like domain-containing CTD phosphatase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0

    Genomic

    1. NW_003314264.1 Reference v1.0

      Range
      2221664..2223228
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024665220.1 → XP_024520988.1  ubiquitin-like domain-containing CTD phosphatase isoform X1

      Conserved Domains (2) summary
      TIGR02245
      Location:131 → 350
      HAD_IIID1; HAD-superfamily subfamily IIID hydrolase, TIGR02245
      cl00155
      Location:20 → 93
      UBQ; Ubiquitin-like proteins

    2. XM_002963233.2 → XP_002963279.1  ubiquitin-like domain-containing CTD phosphatase isoform X2

      See identical proteins and their annotated locations for XP_002963279.1

      UniProtKB/TrEMBL
      D8QY70
      Conserved Domains (3) summary
      TIGR02245
      Location:131 → 325
      HAD_IIID1; HAD-superfamily subfamily IIID hydrolase, TIGR02245
      smart00213
      Location:20 → 93
      UBQ; Ubiquitin homologues
      cl00155
      Location:20 → 93
      UBQ; Ubiquitin-like proteins
    Nucleotide Protein
    Heading Accession and Version

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