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    LOC100304375 uncharacterized LOC100304375 [ Zea mays ]

    Gene ID: 100304375, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC100304375
    Gene description
    uncharacterized LOC100304375
    Locus tag
    ZEAMMB73_Zm00001d007745
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    WAK; srk1; csu811
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 2 NC_050097.1 (237934583..237941029, complement)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 2 NC_024460.2 (238607011..238613457, complement)

    Chromosome 2 - NC_050097.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100216552 Neighboring gene uncharacterized LOC113664109 Neighboring gene uncharacterized LOC114641099 Neighboring gene probable 3-hydroxyisobutyryl-CoA hydrolase 3 Neighboring gene protein argonaute MEL1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cytological and Molecular Characterization of ZmWAK-Mediated Head-Smut Resistance in Maize. Zhang N, et al. Mol Plant Microbe Interact, 2017 Jun. PMID 28358622
    2. Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Gardiner J, et al. Plant Physiol, 2004 Apr. PMID 15020742, Free PMC Article
    3. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    4. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • AC217293.3_FG007

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables polysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Wall-associated receptor kinase 2
    Names
    AC217293.3_FG007
    PCO103575
    S-receptor kinase 1
    S-receptor kinase1
    csuh00811
    csuh811
    putative WAK family receptor-like protein kinase
    wall-associated kinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001165813.1 → NP_001159285.1  Wall-associated receptor kinase 2 precursor

      See identical proteins and their annotated locations for NP_001159285.1

      Status: PROVISIONAL

      Source sequence(s)
      BT060988
      UniProtKB/TrEMBL
      A0A0A7ENF8, A0A0A7ENT1, C0HF82
      Conserved Domains (3) summary
      smart00179
      Location:315 → 354
      EGF_CA; Calcium-binding EGF-like domain
      pfam13947
      Location:24 → 137
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
      cl21453
      Location:422 → 721
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050097.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      237934583..237941029 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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