U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX1652919: Bud_S10_&_community_PacBio
12 PACBIO_SMRT (PacBio RS) runs: 3.6M spots, 2G bases, 1.3Gb downloads

Design: Seven SMRT cells contained fragmented DNA of ~600 bases for obtaining high quality circular consensus sequencing (CCS) reads and five SMRT cells for continuous long read (CLR) sequencing of unfragmented DNA
Submitted by: University of Minnesota
Study: Sequencing the genome of the largest known bacterium: Thiomargarita nelsonii, epibiont of Hydrate Ridge gastropods
show Abstracthide Abstract
Single cell of Thiomargarita nelsonii taken from a snail collected at Hydrate Ridge and DNA amplified by MDA, genome of world's largest bacteria from a metagenome sample.
Sample: Single cell of Thiomargarita nelsonii taken from a snail collected at Hydrate Ridge and DNA amplified by MDA
SAMN03165106 • SRS1353184 • All experiments • All runs
Library:
Name: PacBio
Instrument: PacBio RS
Strategy: WGA
Source: METAGENOMIC
Selection: size fractionation
Layout: SINGLE
Spot descriptor:
forward

Pipeline: show...hide...
ProgramVersion
SMRT Analysis2.2
Runs: 12 runs, 3.6M spots, 2G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR328049575,317123.6M82.4Mb2016-03-24
SRR328049876,757366.3M257.2Mb2016-03-24
SRR3280913577,724228.7M156.1Mb2016-03-24
SRR3280914413,143160.9M110.1Mb2016-03-24
SRR3280915290,238123.1M84.7Mb2016-03-24
SRR3280916449,919176.3M120.5Mb2016-03-24
SRR3280917345,417141.6M97.6Mb2016-03-24
SRR3280918631,594252.6M174.1Mb2016-03-24
SRR3280919624,214245.6M169.4Mb2016-03-24
SRR328092034,43370.4M47.4Mb2016-03-24
SRR328093930,93261.8M41.9Mb2016-03-24
SRR328094028,38957.2M39Mb2016-03-24

ID:
2371618

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...