Targeted sequencing of Desmodium axillare - SRA

SRX22404249: Targeted sequencing of Desmodium axillare
1 ILLUMINA (Illumina HiSeq 3000) run: 1.3M spots, 392.8M bases, 145.9Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Desmodium axillare

SAMN37561185 • SRS19440926 • All experiments • All runs

Organism: Desmodium axillare

Library:

Name: bec1b7f4-39cf-40c3-8f4e-31538fd9d206

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.3M spots, 392.8M bases, 145.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR26704831	1,309,343	392.8M	145.9Mb	2023-11-07

ID:: 30386717

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