Targeted sequencing of Quercus depressa - SRA

SRX22462256: Targeted sequencing of Quercus depressa
1 ILLUMINA (Illumina HiSeq 3000) run: 1.4M spots, 421.6M bases, 159.5Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 7

PRJNA1022027 • SRP471038 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Quercus depressa

SAMN37582246 • SRS19476259 • All experiments • All runs

Organism: Quercus depressa

Library:

Name: 8581aecd-80ef-4ae4-8c26-0090b0db451e

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.4M spots, 421.6M bases, 159.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR26763363	1,405,244	421.6M	159.5Mb	2023-11-09

ID:: 30448045

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