U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX347704: Whole genome shotgun sequencing of Escherichia coli subsp. serovar O145:NM str. 2012C-4478 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 737,425 spots, 341.9M bases, 233.7Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FOOD AND DRUG ADMINISTRATION, CENTER FOR FOOD SAFETY AND APPLIED NUTRITION (CFSAN)
Study: Foodborne Pathogen Survey
show Abstracthide Abstract
Genome Sequencing Project
Sample: Pathogen sample from Escherichia coli O145:NM str. 2012C-4478
SAMN02352669 • SRS478494 • All experiments • All runs
Library:
Name: Escherichia coli str. CFSAN003931_01 shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Escherichia coli subsp. serovar O145:NM str. 2012C-4478.
Spot descriptor:
forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.17.28
Runs: 1 run, 737,425 spots, 341.9M bases, 233.7Mb
Run# of Spots# of BasesSizePublished
SRR975376737,425341.9M233.7Mb2013-09-10

ID:
494056

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...