Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450702: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-212997' containing sample 'M17D1' from individual 'Black6 Uninfected Mouse 2 Day 1'
1 ILLUMINA (Illumina MiSeq) run: 55,742 spots, 19.5M bases, 10.6Mb downloads

UUID: d642b925-fba2-4085-9e52-17a0a01ed711

Design: Illumina sequencing of Mycobacterium tuberculosis M17D1 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02580577 • SRS544091 • All experiments • All runs

Organism: Mycobacterium tuberculosis M17D1

Library:

Name: Solexa-212997

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: WGS

gssr_id: 467750.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C1TY

material_type: DNA:DNA Somatic

product_order: PDO-2661

product_part_number: P-WG-0004

project: G56511

research_project: RP-548

root_sample_id: SM-4QNWW

sample_id: SM-5C1TY

work_request: 39974

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 55,742 spots, 19.5M bases, 10.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145520	55,742	19.5M	10.6Mb	2014-01-27

ID:: 629650

SRA

Sequence Read Archive

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