Illumina amplicon sequencing of metagenomic paired-end library 'Solex... - SRA

SRX450717: Illumina amplicon sequencing of metagenomic paired-end library 'Solexa-213077' containing sample 'M15D31' from individual 'Black6 TB-Infected Mouse 5 Day 31'
1 ILLUMINA (Illumina MiSeq) run: 161,987 spots, 56.7M bases, 30.5Mb downloads

UUID: 81e4a12a-1049-42c3-b578-fdd033717263

Design: Illumina sequencing of Mycobacterium tuberculosis M15D31 via polymerase chain reaction

Submitted by: Broad Institute (BI)

Study: TB-ARC - Microbiome

PRJNA219721 • SRP032325 • All experiments • All runs

Sample:

SAMN02584531 • SRS544106 • All experiments • All runs

Organism: Mycobacterium tuberculosis M15D31

Library:

Name: Solexa-213077

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Spot descriptor:

1 forward176 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithoutReference

data_type: 16S

gssr_id: 469399.0

library_type: 16S

lsid: broadinstitute.org:bsp.prod.sample:5C36P

material_type: DNA:DNA Somatic

product_order: PDO-2860

product_part_number: P-MCV-0002

project: G58719

research_project: RP-114

root_sample_id: SM-4RKGN

sample_id: SM-5C36P

work_request: 39975

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-01-25 18:11:15.0	GAPipeline	RTA1.18.42	Sequencer Application 2.3.0.3

Runs: 1 run, 161,987 spots, 56.7M bases, 30.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1145534	161,987	56.7M	30.5Mb	2014-01-27

ID:: 629665

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