Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX473339: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-322372' containing sample 'M2132'
2 ILLUMINA (Illumina HiSeq 2000) runs: 2.9M spots, 579M bases, 229.7Mb downloads

UUID: 113ee81d-8a6f-4f6a-a89c-e30b95c1533a

Design: Illumina sequencing of Mycobacterium tuberculosis M2132 via random selection

Submitted by: Broad Institute (BI)

Study: TB-ARC - India

PRJNA235770 • SRP038374 • All experiments • All runs

Sample:

SAMN02599104 • SRS559668 • All experiments • All runs

Organism: Mycobacterium tuberculosis M2132

Library:

Name: Pond-322372

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 485178.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:5G5JD

material_type: DNA:DNA Somatic

product_order: PDO-3214

product_part_number: P-WG-0033

project: G57834

research_project: RP-114

root_sample_id: SM-4P8U4

sample_id: SM-5G5JD

work_request: 39949

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2014-02-18 13:26:54.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 2.9M spots, 579M bases, 229.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR1172792	1,427,484	288.4M	114.2Mb	2014-02-20
SRR1175100	1,438,722	290.6M	115.5Mb	2014-02-24

ID:: 653829

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