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SRX992520: Targeted Enrichment of Intronic Sequence Markers for Recent Radiations: A Phylogenomic Example from Heuchera (Saxifragaceae)
1 ILLUMINA (Illumina MiSeq) run: 2.2M spots, 970.3M bases, 635.3Mb downloads

Design: Library construction: NEBnext reagents. Target enrichment: Biotinylated RNA probes (120 bp, 3x coverage of targets) synthesized by MYcroarray, Ann Arbor, Michigan.
Submitted by: The Ohio State University
Study: Heuchera Targeted Locus (Loci)
PRJNA280966 • SRP057104 • All experiments • All runs
show Abstracthide Abstract
15 species (14 species of Heuchera, Mitella pentandra as an outgroup).
Sample:
SAMN03481173 • SRS907237 • All experiments • All runs
Organism: Heuchera pulchella
Library:
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Spot descriptor:
1  forward401  reverse

Pipeline: show...hide...
ProgramVersion
Trimmomatic0.33
BWA0.7.12
MAFFT7.017
Geneious7R
RAxML8.1.3
MP-EST
STAR
Runs: 1 run, 2.2M spots, 970.3M bases, 635.3Mb
Run# of Spots# of BasesSizePublished
SRR19708892,232,045970.3M635.3Mb2015-12-01

ID:
1440336

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