Targeted sequencing of Amphimas ferrugineus - SRA

SRX22459604: Targeted sequencing of Amphimas ferrugineus
1 ILLUMINA (Illumina HiSeq 3000) run: 191,466 spots, 57.4M bases, 18Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 8

PRJNA1022029 • SRP471035 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Amphimas ferrugineus

SAMN37583170 • SRS19473608 • All experiments • All runs

Organism: Amphimas ferrugineus

Library:

Name: 6ed0baaa-60fe-4467-9ade-017ba00832b5

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 191,466 spots, 57.4M bases, 18Mb

Run	# of Spots	# of Bases	Size	Published
SRR26760763	191,466	57.4M	18Mb	2023-11-09

ID:: 30445393

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