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SRX2620646: Deltaproteobacteria bacterium UBA5573
1 ILLUMINA (Illumina HiSeq 1000) run: 259,076 spots, 52.1M bases, 18.3Mb downloads

Design: BWA (BWA-MEM) mapping of Deltaproteobacteria bacterium UBA5573 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 12.87
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Deltaproteobacteria bacterium UBA5573 genome recovered from ERX386639
SAMN06455623 • SRS2030603 • All experiments • All runs
Library:
Name: ERX386639.b3.bam
Instrument: Illumina HiSeq 1000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 259,076 spots, 52.1M bases, 18.3Mb
Run# of Spots# of BasesSizePublished
SRR5321286259,07652.1M18.3Mb2017-09-13

ID:
3796792

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