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SRX2625133: Porphyromonadaceae bacterium UBA6329
1 ILLUMINA (Illumina HiSeq 2500) run: 38,413 spots, 1.2M bases, 516,060b downloads

Design: BWA (BWA-MEM) mapping of Porphyromonadaceae bacterium UBA6329 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 17.93
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
PRJNA348753 • SRP093542 • All experiments • All runs
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Porphyromonadaceae bacterium UBA6329 genome recovered from SRX834627
SAMN06454159 • SRS2035091 • All experiments • All runs
Organism: Porphyromonadaceae bacterium UBA6329
Library:
Name: SRX834627.b10.bam
Instrument: Illumina HiSeq 2500
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 38,413 spots, 1.2M bases, 516,060b
Run# of Spots# of BasesSizePublished
SRR532593838,4131.2M516,060b2017-09-14

ID:
3801279

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