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SRX2621651: Oceanospirillaceae bacterium UBA1126
1 ILLUMINA (Illumina HiSeq 2000) run: 203,554 spots, 39M bases, 32.5Mb downloads

Design: BWA (BWA-MEM) mapping of Oceanospirillaceae bacterium UBA1126 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 14.07
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Oceanospirillaceae bacterium UBA1126 genome recovered from ERX556139
SAMN06451863 • SRS2031608 • All experiments • All runs
Name: ERX556139.b58.bam
Instrument: Illumina HiSeq 2000
Strategy: WGS
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 203,554 spots, 39M bases, 32.5Mb
Run# of Spots# of BasesSizePublished


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