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SRX2626402: Oceanospirillaceae bacterium UBA2001
1 ILLUMINA (Illumina HiSeq 2000) run: 522,834 spots, 16M bases, 5.8Mb downloads

Design: BWA (BWA-MEM) mapping of Oceanospirillaceae bacterium UBA2001 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 10.43
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Oceanospirillaceae bacterium UBA2001 genome recovered from SRX802143
SAMN06454195 • SRS2036359 • All experiments • All runs
Library:
Name: SRX802143.b102.bam
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 522,834 spots, 16M bases, 5.8Mb
Run# of Spots# of BasesSizePublished
SRR5327207522,83416M5.8Mb2017-09-14

ID:
3802548

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