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SRX2626438: Oceanospirillaceae bacterium UBA4576
1 ILLUMINA (Illumina HiSeq 2000) run: 443,993 spots, 13.6M bases, 4.9Mb downloads

Design: BWA (BWA-MEM) mapping of Oceanospirillaceae bacterium UBA4576 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 113.46
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Oceanospirillaceae bacterium UBA4576 genome recovered from SRX802202
SAMN06450530 • SRS2036395 • All experiments • All runs
Library:
Name: SRX802202.b18.bam
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 443,993 spots, 13.6M bases, 4.9Mb
Run# of Spots# of BasesSizePublished
SRR5327243443,99313.6M4.9Mb2017-09-14

ID:
3802584

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