U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX2623937: Acidobacteria bacterium UBA7540
1 ILLUMINA (Illumina HiSeq 2000) run: 4.6M spots, 867.1M bases, 322.5Mb downloads

Design: BWA (BWA-MEM) mapping of Acidobacteria bacterium UBA7540 using version 0.7.12-r1039 and assembled with CLC de novo assembler 4.4.1 with a genome coverage of 119.14
Submitted by: University of Queensland
Study: Recovery of nearly 8,000 uncultivated bacterial and archaeal genomes substantially flesh out the tree of life
show Abstracthide Abstract
Challenges in cultivating microorganisms have limited the phylogenetic diversity of currently available microbial genomes. This is being addressed by advances in sequencing throughput and computational techniques that allow for the cultivation-independent recovery of high-quality bacterial and archaeal genomes directly from metagenomic data. In this study, we recovered 7,903 uncultivated genomes from >1,000 metagenomes available from the Sequence Read Archive. These genomes increase the phylogenetic diversity of current archaeal and bacterial genome trees by >30%.
Sample: Uncultivated Acidobacteria bacterium UBA7540 genome recovered from SRX461727
SAMN06455312 • SRS2033894 • All experiments • All runs
Library:
Name: SRX461727.b2.bam
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: size fractionation
Layout: PAIRED
Runs: 1 run, 4.6M spots, 867.1M bases, 322.5Mb
Run# of Spots# of BasesSizePublished
SRR53237424,587,579867.1M322.5Mb2017-09-13

ID:
3800083

Supplemental Content

Search details

See more...

Recent activity