UCE Target Enrichment of Malakichthys wakiyae : Muscle tissue or fin ... - SRA

SRX14991768: UCE Target Enrichment of Malakichthys wakiyae : Muscle tissue or fin clip
1 ILLUMINA (Illumina HiSeq 2500) run: 3.1M spots, 886.2M bases, 292.8Mb downloads

Design: Quantified samples of 100 L volume were sent to Arbor Biosciences (Ann Arbor, MI) for library preparation (e.g., DNA shearing, size selection, cleanup), target capture, enrichment, sequencing on an Illumina HiSeq 2500, and demultiplexing. The myBaits UCE Actinopterygians 0.5Kv1 (cat# 305008) probe set, a 500 loci UCE actinopterygian-focused probe set (Faircloth, B.C. et al., 2013), was used for sequencing.

Submitted by: University of Kansas

Study: Investigations into the ancestry of the Grape-eye Seabass

PRJNA831283 • SRP372155 • All experiments • All runs

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This study was an Investigation into the evolutionary history of the Grape-eye Seabass (Hemilutjanus macrophthalmos) that tested its relationships relative to other fishes and demonstrated its placement among the acropomatiform fishes. With the revised phylogeny and classification of acropomatiform fishes resulting from this study, the evolution of bioluminescence and the invasion of the deep sea will be investigated.

Sample:

SAMN27750796 • SRS12741102 • All experiments • All runs

Organism: Malakichthys wakiyae

Library:

Name: 200229

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 3.1M spots, 886.2M bases, 292.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR18913834	3,137,502	886.2M	292.8Mb	2024-05-01

ID:: 21446499

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