WGS of Manihot pinatiloba herbarium leaf tissue - SRA

SRX8931763: WGS of Manihot pinatiloba herbarium leaf tissue
1 ILLUMINA (HiSeq X Ten) run: 16.8M spots, 5.1G bases, 1.8Gb downloads

Design: DNA visualized on a 1.4% agarose gel and sheared as needed to a 350 target using a qSonica machine (many samples required no shearing). Libraries were prepared using the Blunt-End Single-Tube method (Caroe et al 10.1111/2041-210X.12871) and size-selected using AMPure beads

Submitted by: Smithsonian Institution, National Museum of Natural History

Study: Manihot phylogenomics

PRJNA655821 • SRP277161 • All experiments • All runs

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Whole genome sequencing of 157 Manihot spp. and 1 Cnidoscolus sp. specimens for phylogenomic revision using herbarium specimens, with a focus on new taxa and South American species.

Sample:

SAMN15756013 • SRS7187627 • All experiments • All runs

Organism: Manihot pinatiloba

Library:

Name: Manihot_pinatiloba_Mendoza_4341

Instrument: HiSeq X Ten

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 16.8M spots, 5.1G bases, 1.8Gb

Run	# of Spots	# of Bases	Size	Published
SRR12435955	16,790,424	5.1G	1.8Gb	2021-07-01

ID:: 11612774

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