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SRX10528873: Hybseq of Orchidantha gigantea.: JLS1490
1 ILLUMINA (HiSeq X Ten) run: 3.4M spots, 860.3M bases, 287.4Mb downloads

Design: HybSeq DNA capture, baits using oneKP Orchidantha transcriptome assembly (LSKK), filtering done using Sondovac script with repetetive elements identified from Musa (SRX3579252). Exon identification not done due to incomplete assembly. Libraries filtered using Trimmomatic.
Submitted by: Singapore Botanic Gardens
Study: Orchidantha HybSeq libraries
show Abstracthide Abstract
HybSeq capture of Orchidantha (Lowiaceae) and outgroup Zingiberales, using Orchidantha-specific transcriptome-based baits
Sample: Orchidantha_gigantea_JLS1490
SAMN18477490 • SRS8652380 • All experiments • All runs
Name: Orchidantha_gigantea_JLS1490_hybseq
Instrument: HiSeq X Ten
Strategy: Targeted-Capture
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 3.4M spots, 860.3M bases, 287.4Mb
Run# of Spots# of BasesSizePublished


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