Targeted sequencing of Senegalia monacantha - SRA

SRX22462988: Targeted sequencing of Senegalia monacantha
1 ILLUMINA (Illumina HiSeq 3000) run: 187,164 spots, 56.1M bases, 23.6Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 6

PRJNA1022025 • SRP471042 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Senegalia monacantha

SAMN37581015 • SRS19476987 • All experiments • All runs

Organism: Senegalia monacantha

Library:

Name: 6472c737-3097-4641-b15c-3078c6b9fdb9

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 187,164 spots, 56.1M bases, 23.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR26764191	187,164	56.1M	23.6Mb	2023-11-09

ID:: 30448777

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity