U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX13393005: Anchored hybrid enrichment sequencing of Hishimonus viraktamathi
1 ILLUMINA (Illumina HiSeq 2500) run: 1M spots, 312.6M bases, 124.1Mb downloads

Design: Target loci were captured and enriched using a probe kit specific for Membracoidea followed by Illumina PE150 sequencing at Rapid Genomics LLC.
Submitted by: University of Illinois at Urbana-Champaign
Study: Anchored hybrid enrichment sequencing of Cicadellidae
show Abstracthide Abstract
The hemipteran family Cicadellidae (leafhoppers) is one of the 10 largest families of insects with over 23,000 described species. This sap-feeding group contains many species of agricultural importance, including some notorious vectors of plant diseases. Phylogenetic relationships have not been well studied for many lineages within this group. Besides, associations between specific leafhopper species and bacterial group (e.g., endosymbionts, phytoplasmas) are largely unknown. This project aims to perform a large-scale phylogenetic study of leafhoppers as well as investigate the leafhopper-bacteria associations using the genes captured by the anchored hybrid method.
Sample:
SAMN23135458 • SRS11296193 • All experiments • All runs
Library:
Name: P009_WF05
Instrument: Illumina HiSeq 2500
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 1M spots, 312.6M bases, 124.1Mb
Run# of Spots# of BasesSizePublished
SRR172131861,042,023312.6M124.1Mb2022-03-02

ID:
18477739

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...