U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX14663410: UCE raw data, filtered, adapters removed: USNMENT01322446
1 ILLUMINA (Illumina HiSeq 2500) run: 2.3M spots, 542.3M bases, 286.4Mb downloads

Design: Ultraconserved elements sequencing: PCR-based library prep with Kapa HyperPrep kits followed by pooling of 8-12 samples prior to enrichment; enrichment based on an RNA probe set targeting 2,590 UCE loci conserved across Hymenoptera, following the manufacturer's protocol. Enriched samples pooled at equimolar weights and size-selected with BluePippin prior to sequencing
Submitted by: National Museum of Natural History
Study: Phyogenomics and systematics of Braconidae (Hymenoptera)
show Abstracthide Abstract
This project contains data used in the study entitled:Phylogenomics of braconid wasps (Hymenoptera, Braconidae) sheds light on classification and the evolution of parasitoid life history traitsby Jovana Jasso-Martinez, Bernardo F. Santos et al. Data were generated through targeted enrichment of ultraconserved elements using a probe set targeting 2,590 loci conserved across Hymenoptera, followed by Illumina sequencing. The resulting UCE loci were used for phylogenetic inference in a dataset including over 400 species, with implications for braconid classification and the understanding of the evolution of host use in the family.
Sample: UCE target enrichment of Aspilota sp.
SAMN26554216 • SRS12428014 • All experiments • All runs
Library:
Name: AsSp2_BBP508
Instrument: Illumina HiSeq 2500
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 2.3M spots, 542.3M bases, 286.4Mb
Run# of Spots# of BasesSizePublished
SRR185335252,291,629542.3M286.4Mb2022-09-01

ID:
20974699

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...