Illumina HiSeq 2000 paired end sequencing - SRA

ERX1439820: Illumina HiSeq 2000 paired end sequencing
1 ILLUMINA (Illumina HiSeq 2000) run: 15.5M spots, 3.1G bases, 2Gb downloads

Submitted by: UNIVERSITY OF DUISBURG-ESSEN

Study: Comprehensive transcriptome analysis of 18 chrysophyte strains provides new insights into nutritional strategies and phylogenetic relationships of chrysophytes.

PRJEB13662 • ERP015223 • All experiments • All runs

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We sequenced the mRNA of 18 chrysophyte strains on the Illumina HiSeq platform and constructed functionally annotated reference transcriptomes of each strain. These transcriptomes were used to compare and analyse differences in gene expression and determined the influence of the trophic mode, phototrophic, mixotrophic and heterotrophic, on gene expression and shifts in metabolic pathways.

Sample: Spumella bureschii strain JBL14 mRNA

SAMEA3936176 • ERS1123310 • All experiments • All runs

Organism: Spumella-like flagellate JBL14

Library:

Name: unspecified

Instrument: Illumina HiSeq 2000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: Oligo-dT

Layout: PAIRED

Runs: 1 run, 15.5M spots, 3.1G bases, 2Gb

Run	# of Spots	# of Bases	Size	Published
ERR1368694	15,494,585	3.1G	2Gb	2016-07-25

ID:: 2841032

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