Raw reads of Acromitus sp. - SRA

SRX21354308: Raw reads of Acromitus sp.
1 ILLUMINA (Illumina HiSeq 4000) run: 19.4M spots, 5.9G bases, 2.2Gb downloads

Design: Genomic DNA was extracted using E.Z.N.A Mollusc DNA Kit (Omega Bio-tek) with a modified elution step. The first elute of 50 L was discarded to remove smaller fragments, and high quality gDNA was then retained and cleaned using Zymo Genomic DNA Clean and Concentrator. Sonication of purified gDNA to a mode fragment length of 200bp was done using Bioruptor Pico (Diagenode), and dual-indexed libraries were prepared using KAPA HyperPrep Kit (KK8502; KAPA Biosystems), according to manufacturer's recommendations, with a final double-size selection to narrow fragment size distribution prior to library amplification (six cycles). All cnidarian libraries were then pooled with six other samples of sponges in equimolar amounts and sequenced on a single HiSeq 4000 lane (150150bp).

Submitted by: National University of Singapore

Study: Revisiting mitogenome evolution in Medusozoa with eight new mitochondrial genomes

PRJNA934731 • SRP454847 • All experiments • All runs

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Seven new complete mitogenomes (two hydrozoans, five scyphozoans) and one new partial cubozoan mitogenome, sequenced using Illumina and assembled with SPAdes and NOVOPlasty

Sample: ZRC.CNI.1436

SAMN33774510 • SRS18599138 • All experiments • All runs

Organism: Acromitus sp. ZRC CNI 1436

Library:

Name: ZRC.CNI.1436

Instrument: Illumina HiSeq 4000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 19.4M spots, 5.9G bases, 2.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR25627440	19,400,355	5.9G	2.2Gb	2023-08-14

ID:: 28791960

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