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SRX21354309: Raw reads of Cassiopea sp.
1 ILLUMINA (Illumina HiSeq 4000) run: 314.6M spots, 95G bases, 32.4Gb downloads

Design: Genomic DNA was extracted using E.Z.N.A Mollusc DNA Kit (Omega Bio-tek) with a modified elution step. The first elute of 50 L was discarded to remove smaller fragments, and high quality gDNA was then retained and cleaned using Zymo Genomic DNA Clean and Concentrator. Sonication of purified gDNA to a mode fragment length of 200bp was done using Bioruptor Pico (Diagenode), and dual-indexed libraries were prepared using KAPA HyperPrep Kit (KK8502; KAPA Biosystems), according to manufacturer's recommendations, with a final double-size selection to narrow fragment size distribution prior to library amplification (six cycles). All cnidarian libraries were then pooled with six other samples of sponges in equimolar amounts and sequenced on a single HiSeq 4000 lane (150150bp).
Submitted by: National University of Singapore
Study: Revisiting mitogenome evolution in Medusozoa with eight new mitochondrial genomes
show Abstracthide Abstract
Seven new complete mitogenomes (two hydrozoans, five scyphozoans) and one new partial cubozoan mitogenome, sequenced using Illumina and assembled with SPAdes and NOVOPlasty
Sample: ZRC.CNI.3022
SAMN33774511 • SRS18599139 • All experiments • All runs
Library:
Name: ZRC.CNI.3022
Instrument: Illumina HiSeq 4000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 314.6M spots, 95G bases, 32.4Gb
Run# of Spots# of BasesSizePublished
SRR25627439314,604,26595G32.4Gb2023-08-14

ID:
28791961

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