Targeted sequencing of Alysicarpus quartinianus - SRA

SRX22404927: Targeted sequencing of Alysicarpus quartinianus
1 ILLUMINA (Illumina HiSeq 3000) run: 1.4M spots, 416.3M bases, 152.9Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

show Abstracthide Abstract

Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Alysicarpus quartinianus

SAMN37561913 • SRS19441604 • All experiments • All runs

Organism: Alysicarpus quartinianus

Library:

Name: 1075ebeb-9a3a-4d8d-89c6-ed39c19496fa

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.4M spots, 416.3M bases, 152.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR26705155	1,387,522	416.3M	152.9Mb	2023-11-07

ID:: 30387395

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity