Targeted sequencing of Desmodium metallicum - SRA

SRX22404251: Targeted sequencing of Desmodium metallicum
1 ILLUMINA (Illumina HiSeq 3000) run: 3.2M spots, 972.1M bases, 363.7Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Desmodium metallicum

SAMN37561187 • SRS19440928 • All experiments • All runs

Organism: Desmodium metallicum

Library:

Name: 1c188e0d-45de-4235-b0e0-9e79913d6f5b

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 3.2M spots, 972.1M bases, 363.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR26704829	3,240,234	972.1M	363.7Mb	2023-11-07

ID:: 30386719

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