Targeted sequencing of Lonchocarpus pittieri - SRA

SRX22459622: Targeted sequencing of Lonchocarpus pittieri
1 ILLUMINA (Illumina HiSeq 3000) run: 157,498 spots, 47.2M bases, 14.8Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 8

PRJNA1022029 • SRP471035 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Lonchocarpus pittieri

SAMN37583207 • SRS19473631 • All experiments • All runs

Organism: Lonchocarpus pittieri

Library:

Name: c194d48b-4bd1-4362-a218-898d25b2e901

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 157,498 spots, 47.2M bases, 14.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR26760745	157,498	47.2M	14.8Mb	2023-11-09

ID:: 30445411

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