Targeted sequencing of Senna atomaria - SRA

SRX22463373: Targeted sequencing of Senna atomaria
1 ILLUMINA (Illumina HiSeq 3000) run: 845,489 spots, 253.6M bases, 111.2Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 6

PRJNA1022025 • SRP471042 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Senna atomaria

SAMN37580772 • SRS19477371 • All experiments • All runs

Organism: Senna atomaria

Library:

Name: 90771320-8f58-4c8b-acdd-00d4a39dff37

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 845,489 spots, 253.6M bases, 111.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR26764742	845,489	253.6M	111.2Mb	2023-11-09

ID:: 30449162

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