SRA

SRX036774: Demonstration Project Reference Genome for Human Microbiome Project
1 ILLUMINA (Illumina Genome Analyzer II) run: 3.7M spots, 736.1M bases, 344.4Mb downloads

Design: Illumina sequencing of HMP Reference Genome for Escherichia coli MS 175-1 H_KT-175-1-0089515623 paired end RANDOM library

Submitted by: The Genome Center at Washington University School of Medicine in St. Louis (WUGSC)

Study: Demonstration Project Reference Genome for Human Microbiome Project

PRJNA47263 • SRP004999 • All experiments • All runs

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This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

Sample: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 175-1

SAMN00189173 • SRS150855 • All experiments • All runs

Organism: Escherichia coli MS 175-1

Library:

Name: 2853155853

Instrument: Illumina Genome Analyzer II

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward barcode

Group tag	Basecalls
GGCTAC	GGCTAC
TAGCTT	TAGCTT
TTAGGC	TTAGGC
CAGATC	CAGATC
ATCACG	ATCACG
GCCAAT	GCCAAT
CGATGT	CGATGT
ACAGTG	ACAGTG
TGACCA	TGACCA
CTTGTA	CTTGTA
ACTTGA	ACTTGA
GATCAG	GATCAG

107 reverse

Runs: 1 run, 3.7M spots, 736.1M bases, 344.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR088913	3,680,608	736.1M	344.4Mb	2011-01-03

ID:: 43949

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txid749544[Organism:noexp] (1)
SRA
Porphyria, Acute Intermittent
Porphyria, Acute Intermittent
An autosomal dominant porphyria that is due to a deficiency of HYDROXYMETHYLBILANE SYNTHASE in the LIVER, the third enzyme in the 8-enzyme biosynthetic pathway of HEME. Clinic...<br/>Year introduced: 1993

MeSH
Cutis Laxa, Autosomal Recessive, Type I [Supplementary Concept]
Cutis Laxa, Autosomal Recessive, Type I [Supplementary Concept]
Date introduced: November 5, 2012<br/>

MeSH
MeSH for MedGen (Select 78663) (1)
MeSH
MeSH for MedGen (Select 56452) (1)
MeSH

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